STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF_0539Hypothetical protein. (352 aa)    
Predicted Functional Partners:
DPF_0537
Sodium transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.960
DPF_0334
Pyruvate-ferredoxin oxidoreductase.
    
  0.899
DPF_1824
Pyridine nucleotide-disulfide oxidoreductase.
    
  0.868
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.867
guaB
Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.792
DPF_1388
Arabinose 5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
    
  0.763
DPF_0368
Hypothetical protein.
    
 0.751
DPF_1176
Histidine kinase.
    
 0.726
DPF_1199
Hypothetical protein.
    
 0.645
DPF_1823
Glutamate synthase; Belongs to the glutamate synthase family.
    
  0.630
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.