STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcpHydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (550 aa)    
Predicted Functional Partners:
DPF_0334
Pyruvate-ferredoxin oxidoreductase.
    
 0.940
DPF_1829
NADH-ubiquinone oxidoreductase subunit 3.
    
 0.828
DPF_1225
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.756
DPF_2630
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.756
DPF_2581
Hydroxylamine oxidoreductase.
    
 0.730
DPF_2375
Trehalose-binding protein.
   
 
  0.721
DPF_1125
Heterodisulfide reductase.
    
 0.704
DPF_1797
Pyridine nucleotide-disulfide oxidoreductase.
  
  
 0.676
DPF_1824
Pyridine nucleotide-disulfide oxidoreductase.
     
 0.671
DPF_2582
Cytochrome C.
    
 0.597
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
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