STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF_1075Hypothetical protein. (74 aa)    
Predicted Functional Partners:
lolD
ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.944
DPF_1752
ABC transporter.
  
 0.944
DPF_2040
Hypothetical protein.
  
 0.944
DPF_0363
RND transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.829
DPF_1334
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.829
DPF_1461
RND transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.829
DPF_1567
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.829
DPF_1340
Hypothetical protein.
  
 
 0.760
DPF_0880
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.740
DPF_0978
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.740
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
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