STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF_2374Formate dehydrogenase. (188 aa)    
Predicted Functional Partners:
DPF_2373
Formate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  0.997
DPF_2372
Formate dehydrogenase subunit beta.
 
 0.989
DPF_1529
Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.976
DPF_1824
Pyridine nucleotide-disulfide oxidoreductase.
  
 0.959
DPF_0334
Pyruvate-ferredoxin oxidoreductase.
  
 
 0.953
DPF_0278
Heterodisulfide reductase subunit A.
  
 0.951
DPF_1827
Formate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.945
DPF_1530
Formate dehydrogenase.
 
 0.937
DPF_0474
Cytochrome C.
  
 0.880
DPF_0341
4Fe-4S ferredoxin.
 
 0.855
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
Server load: low (14%) [HD]