STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF_2477Histidine kinase. (489 aa)    
Predicted Functional Partners:
DPF_2438
Hypothetical protein.
 
0.990
DPF_1176
Histidine kinase.
0.986
DPF_0368
Hypothetical protein.
 
0.982
DPF_0706
Chemotaxis protein CheV.
  
 0.982
DPF_1034
Hybrid sensor histidine kinase/response regulator.
 
0.980
DPF_1199
Hypothetical protein.
 
0.978
DPF_2591
Hypothetical protein.
 
0.968
DPF_0865
Hypothetical protein.
 
0.961
DPF_1359
Diguanylate cyclase.
  
 0.961
DPF_2476
Fis family transcriptional regulator.
  0.961
Your Current Organism:
Desulfoplanes formicivorans
NCBI taxonomy Id: 1592317
Other names: D. formicivorans, DSM 28890, Desulfomicrobiaceae bacterium Pf12B, Desulfoplanes formicivorans Watanabe et al. 2015, NBRC 110391, strain Pf12B
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.