STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001757355_04383Unannotated protein. (129 aa)    
Predicted Functional Partners:
GCA_001757355_02385
Unannotated protein.
  
 0.999
GCA_001757355_03242
Unannotated protein.
  
 0.986
GCA_001757355_03436
Unannotated protein.
   
 
 0.866
GCA_001757355_01089
Unannotated protein.
 
 
 0.766
GCA_001757355_00673
Unannotated protein.
    
 0.756
GCA_001757355_02694
Unannotated protein.
  
  
 0.746
GCA_001757355_03250
Unannotated protein.
  
 
 0.743
GCA_001757355_01087
Unannotated protein.
    
 0.728
GCA_001757355_01863
Unannotated protein.
  
 
 0.728
GCA_001757355_02752
Unannotated protein.
   
 0.728
Your Current Organism:
Sphingobium phenoxybenzoativorans
NCBI taxonomy Id: 1592790
Other names: CCTCC AB 2014349, KACC 42448, S. phenoxybenzoativorans, Sphingobium phenoxybenzoativorans Cai et al. 2015, Sphingobium sp. SC_3, strain SC_3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.