STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase. (319 aa)    
Predicted Functional Partners:
trx
Thioredoxin; Belongs to the thioredoxin family.
 
 0.999
AKQ33241.1
Thioredoxin peroxidase.
  
 
 0.981
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.884
lpdA
Dihydrolipoyl dehydrogenase.
  
 0.763
AKQ33597.1
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 
 0.751
grxC
Glutaredoxin.
   
 0.735
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.649
AKQ33884.1
Pyridine nucleotide-disulfide oxidoreductase; Belongs to the FAD-dependent oxidoreductase family.
  
 
 0.618
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.603
aspC
Aspartate aminotransferase.
  
 
 0.602
Your Current Organism:
Coxiellalike endosymbiont
NCBI taxonomy Id: 1592897
Other names: C. endosymbiont, Coxiella-like endosymbiont
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