STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufDFeS assembly protein SufD. (431 aa)    
Predicted Functional Partners:
sufC
FeS assembly ATPase SufC.
 
 0.999
AKQ33784.1
FeS assembly protein SufB.
 
0.999
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.988
AKQ33780.1
FeS assembly protein, contains SufU and SufA.
 
  
 0.849
AKQ33779.1
Putative cytosolic protein.
 
   
 0.723
AKQ33785.1
FeS assembly SUF system regulator.
     
 0.631
AKQ33657.1
IscU.
  
  
 0.588
erpA
Iron--sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.
  
 
 0.545
rlmE
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
       0.478
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.450
Your Current Organism:
Coxiellalike endosymbiont
NCBI taxonomy Id: 1592897
Other names: C. endosymbiont, Coxiella-like endosymbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.