STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717475_00287Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000717475_00288
Unannotated protein.
 
     0.812
GCA_000717475_00286
Unannotated protein.
       0.790
GCA_000717475_00992
Unannotated protein.
    
  0.775
GCA_000717475_00167
Unannotated protein.
    
  0.750
GCA_000717475_02701
Unannotated protein.
    
  0.750
GCA_000717475_03472
Unannotated protein.
    
  0.750
GCA_000717475_00912
Unannotated protein.
     
 0.745
GCA_000717475_02377
Unannotated protein.
     
 0.745
GCA_000717475_00289
Unannotated protein.
  
    0.694
GCA_000717475_00290
Unannotated protein.
       0.694
Your Current Organism:
Desulfonatronum thiodismutans
NCBI taxonomy Id: 159290
Other names: ATCC BAA-395, D. thiodismutans, DSM 14708, Desulfonatronum sp. MLF1, Desulfonatronum thiodismutans Pikuta et al. 2003, strain MLF-1, strain MLF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.