STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717475_00333Unannotated protein. (385 aa)    
Predicted Functional Partners:
GCA_000717475_02539
Unannotated protein.
 
  
 0.764
GCA_000717475_02756
Unannotated protein.
 
      0.576
GCA_000717475_02548
Unannotated protein.
 
    0.508
GCA_000717475_00332
Unannotated protein.
       0.493
GCA_000717475_00334
Unannotated protein.
  
  
 0.492
GCA_000717475_02678
Unannotated protein.
  
  
 0.490
GCA_000717475_00560
Unannotated protein.
   
    0.431
GCA_000717475_02615
Unannotated protein.
   
    0.431
GCA_000717475_00147
Unannotated protein.
  
    0.419
GCA_000717475_00331
Unannotated protein.
       0.418
Your Current Organism:
Desulfonatronum thiodismutans
NCBI taxonomy Id: 159290
Other names: ATCC BAA-395, D. thiodismutans, DSM 14708, Desulfonatronum sp. MLF1, Desulfonatronum thiodismutans Pikuta et al. 2003, strain MLF-1, strain MLF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.