STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717475_00959Unannotated protein. (262 aa)    
Predicted Functional Partners:
GCA_000717475_02072
Unannotated protein.
    
 0.991
GCA_000717475_02777
Unannotated protein.
   
 0.991
GCA_000717475_03003
Unannotated protein.
    
 0.991
GCA_000717475_03163
Unannotated protein.
    
 0.969
GCA_000717475_02131
Unannotated protein.
   
 0.963
GCA_000717475_01934
Unannotated protein.
   
 0.961
GCA_000717475_03245
Unannotated protein.
   
  0.945
GCA_000717475_02346
Unannotated protein.
   
 0.944
GCA_000717475_00653
Unannotated protein.
   
  0.938
GCA_000717475_02677
Unannotated protein.
    
 0.898
Your Current Organism:
Desulfonatronum thiodismutans
NCBI taxonomy Id: 159290
Other names: ATCC BAA-395, D. thiodismutans, DSM 14708, Desulfonatronum sp. MLF1, Desulfonatronum thiodismutans Pikuta et al. 2003, strain MLF-1, strain MLF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.