STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717475_01831Unannotated protein. (109 aa)    
Predicted Functional Partners:
GCA_000717475_01934
Unannotated protein.
   
 0.993
GCA_000717475_02072
Unannotated protein.
   
 0.991
GCA_000717475_02705
Unannotated protein.
    
  0.978
GCA_000717475_02706
Unannotated protein.
    
  0.975
GCA_000717475_02346
Unannotated protein.
    
 0.960
GCA_000717475_03245
Unannotated protein.
   
 0.959
GCA_000717475_03305
Unannotated protein.
   
  0.959
GCA_000717475_00653
Unannotated protein.
   
 0.948
GCA_000717475_00052
Unannotated protein.
   
 0.927
GCA_000717475_02148
Unannotated protein.
    
  0.919
Your Current Organism:
Desulfonatronum thiodismutans
NCBI taxonomy Id: 159290
Other names: ATCC BAA-395, D. thiodismutans, DSM 14708, Desulfonatronum sp. MLF1, Desulfonatronum thiodismutans Pikuta et al. 2003, strain MLF-1, strain MLF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.