STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717475_03086Unannotated protein. (454 aa)    
Predicted Functional Partners:
GCA_000717475_02392
Unannotated protein.
 
 
 0.762
GCA_000717475_02777
Unannotated protein.
    
  0.756
GCA_000717475_03088
Unannotated protein.
  
  
 
0.630
GCA_000717475_03356
Unannotated protein.
    
 0.609
GCA_000717475_00966
Unannotated protein.
   
 0.586
GCA_000717475_01024
Unannotated protein.
   
 0.586
GCA_000717475_02170
Unannotated protein.
   
 0.567
GCA_000717475_03520
Unannotated protein.
   
 0.567
GCA_000717475_00522
Unannotated protein.
    
  0.564
GCA_000717475_00176
Unannotated protein.
  
     0.561
Your Current Organism:
Desulfonatronum thiodismutans
NCBI taxonomy Id: 159290
Other names: ATCC BAA-395, D. thiodismutans, DSM 14708, Desulfonatronum sp. MLF1, Desulfonatronum thiodismutans Pikuta et al. 2003, strain MLF-1, strain MLF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.