Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP88381.1 | SIP99221.1 | SAMN05920897_101118 | SAMN05920897_102123 | Adenylosuccinate lyase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.969 |
SIP88381.1 | SIP99244.1 | SAMN05920897_101118 | SAMN05920897_102124 | Adenylosuccinate lyase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.971 |
SIP88381.1 | SIP99395.1 | SAMN05920897_101118 | SAMN05920897_102130 | Adenylosuccinate lyase. | GMP synthase (glutamine-hydrolysing). | 0.973 |
SIP88381.1 | SIQ12998.1 | SAMN05920897_101118 | SAMN05920897_10462 | Adenylosuccinate lyase. | Aspartate carbamoyltransferase. | 0.499 |
SIP88381.1 | SIQ47647.1 | SAMN05920897_101118 | SAMN05920897_10995 | Adenylosuccinate lyase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.847 |
SIP88381.1 | SIQ66796.1 | SAMN05920897_101118 | SAMN05920897_112118 | Adenylosuccinate lyase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.601 |
SIP88381.1 | guaB | SAMN05920897_101118 | SAMN05920897_102128 | Adenylosuccinate lyase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.877 |
SIP88381.1 | purA | SAMN05920897_101118 | SAMN05920897_102129 | Adenylosuccinate lyase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.997 |
SIP88381.1 | purC | SAMN05920897_101118 | SAMN05920897_11465 | Adenylosuccinate lyase. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.992 |
SIP99221.1 | SIP88381.1 | SAMN05920897_102123 | SAMN05920897_101118 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Adenylosuccinate lyase. | 0.969 |
SIP99221.1 | SIP99244.1 | SAMN05920897_102123 | SAMN05920897_102124 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.998 |
SIP99221.1 | SIP99395.1 | SAMN05920897_102123 | SAMN05920897_102130 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | GMP synthase (glutamine-hydrolysing). | 0.926 |
SIP99221.1 | SIQ12998.1 | SAMN05920897_102123 | SAMN05920897_10462 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Aspartate carbamoyltransferase. | 0.876 |
SIP99221.1 | SIQ47647.1 | SAMN05920897_102123 | SAMN05920897_10995 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.779 |
SIP99221.1 | SIQ66796.1 | SAMN05920897_102123 | SAMN05920897_112118 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.492 |
SIP99221.1 | argG | SAMN05920897_102123 | SAMN05920897_11431 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.538 |
SIP99221.1 | guaB | SAMN05920897_102123 | SAMN05920897_102128 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.904 |
SIP99221.1 | purA | SAMN05920897_102123 | SAMN05920897_102129 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.942 |
SIP99221.1 | purC | SAMN05920897_102123 | SAMN05920897_11465 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.965 |
SIP99244.1 | SIP88381.1 | SAMN05920897_102124 | SAMN05920897_101118 | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | Adenylosuccinate lyase. | 0.971 |
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