STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ44841.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (241 aa)    
Predicted Functional Partners:
SIP88270.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.955
SIQ74155.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.941
SIQ74278.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.930
SIR10652.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.903
SIQ89285.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
 0.886
SIQ22570.1
Glutamate synthase (NADH) large subunit.
    
 0.883
SIQ34743.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.874
SIQ45429.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.857
SIQ29007.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.799
SIQ79485.1
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
   
 
 0.793
Your Current Organism:
Alkalispirochaeta americana
NCBI taxonomy Id: 159291
Other names: A. americana, ATCC BAA-392, Alkalispirochaeta americana (Hoover et al. 2003) Sravanthi et al. 2016, DSM 14872, Spirochaeta americana, Spirochaeta americana Hoover et al. 2003, Spirochaeta sp. ASpG1, strain ASpG1
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