STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ57093.1Beta-galactosidase. (1036 aa)    
Predicted Functional Partners:
SIQ57127.1
Alpha-galactosidase.
 
 
 0.989
SIQ76400.1
Alpha-galactosidase.
 
  
 0.895
SIQ39522.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.883
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
    
 0.824
SIQ26881.1
Aldose 1-epimerase.
 
 
 0.809
SIQ11677.1
Glucokinase.
    
 0.807
SIQ21375.1
Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.787
SIQ57162.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.782
SIQ57198.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
    0.781
SIQ81264.1
Hexosaminidase.
 
 0.772
Your Current Organism:
Alkalispirochaeta americana
NCBI taxonomy Id: 159291
Other names: A. americana, ATCC BAA-392, Alkalispirochaeta americana (Hoover et al. 2003) Sravanthi et al. 2016, DSM 14872, Spirochaeta americana, Spirochaeta americana Hoover et al. 2003, Spirochaeta sp. ASpG1, strain ASpG1
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