STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ97585.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (296 aa)    
Predicted Functional Partners:
SIQ97614.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.980
SIQ97559.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.967
SIQ26278.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.944
SIQ97663.1
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase.
 
     0.930
SIQ76011.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.883
SIQ81441.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.879
SIQ41565.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
 0.878
SIR03948.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.871
SIR03862.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
 0.870
SIQ41621.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.868
Your Current Organism:
Alkalispirochaeta americana
NCBI taxonomy Id: 159291
Other names: A. americana, ATCC BAA-392, Alkalispirochaeta americana (Hoover et al. 2003) Sravanthi et al. 2016, DSM 14872, Spirochaeta americana, Spirochaeta americana Hoover et al. 2003, Spirochaeta sp. ASpG1, strain ASpG1
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