STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ98730.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
SIQ98762.1
Hypothetical protein.
       0.732
SIQ98634.1
Hypothetical protein.
       0.634
SIQ98662.1
Phage tail protein domain-containing protein.
       0.634
SIQ98697.1
Protein of unknown function.
       0.634
SIQ98601.1
Inner membrane component of T3SS domain-containing protein.
       0.490
SIQ98539.1
Hypothetical protein.
       0.481
SIQ98570.1
VWFA-related domain-containing protein.
       0.481
SIQ98797.1
Conserved hypothetical phage tail region protein.
       0.473
SIQ98512.1
Conserved hypothetical phage tail region protein.
       0.456
SIQ98478.1
Hypothetical protein.
       0.433
Your Current Organism:
Alkalispirochaeta americana
NCBI taxonomy Id: 159291
Other names: A. americana, ATCC BAA-392, Alkalispirochaeta americana (Hoover et al. 2003) Sravanthi et al. 2016, DSM 14872, Spirochaeta americana, Spirochaeta americana Hoover et al. 2003, Spirochaeta sp. ASpG1, strain ASpG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.