Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP88270.1 | SIQ15314.1 | SAMN05920897_101111 | SAMN05920897_104149 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Cd2+/Zn2+-exporting ATPase. | 0.513 |
SIP88270.1 | SIQ39031.1 | SAMN05920897_101111 | SAMN05920897_10830 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transcriptional regulator, ArsR family. | 0.492 |
SIP88270.1 | SIQ63723.1 | SAMN05920897_101111 | SAMN05920897_11228 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Cd2+/Zn2+-exporting ATPase. | 0.513 |
SIP88270.1 | SIQ87176.1 | SAMN05920897_101111 | SAMN05920897_1175 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Cu+-exporting ATPase. | 0.623 |
SIP88270.1 | SIR07782.1 | SAMN05920897_101111 | SAMN05920897_1354 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | DNA-binding transcriptional regulator, ArsR family. | 0.492 |
SIQ15314.1 | SIP88270.1 | SAMN05920897_104149 | SAMN05920897_101111 | Cd2+/Zn2+-exporting ATPase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.513 |
SIQ15314.1 | SIQ39031.1 | SAMN05920897_104149 | SAMN05920897_10830 | Cd2+/Zn2+-exporting ATPase. | Transcriptional regulator, ArsR family. | 0.673 |
SIQ15314.1 | SIQ87176.1 | SAMN05920897_104149 | SAMN05920897_1175 | Cd2+/Zn2+-exporting ATPase. | Cu+-exporting ATPase. | 0.880 |
SIQ15314.1 | SIR07782.1 | SAMN05920897_104149 | SAMN05920897_1354 | Cd2+/Zn2+-exporting ATPase. | DNA-binding transcriptional regulator, ArsR family. | 0.487 |
SIQ39031.1 | SIP88270.1 | SAMN05920897_10830 | SAMN05920897_101111 | Transcriptional regulator, ArsR family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.492 |
SIQ39031.1 | SIQ15314.1 | SAMN05920897_10830 | SAMN05920897_104149 | Transcriptional regulator, ArsR family. | Cd2+/Zn2+-exporting ATPase. | 0.673 |
SIQ39031.1 | SIQ51952.1 | SAMN05920897_10830 | SAMN05920897_11033 | Transcriptional regulator, ArsR family. | NAD-dependent deacetylase. | 0.433 |
SIQ39031.1 | SIQ63723.1 | SAMN05920897_10830 | SAMN05920897_11228 | Transcriptional regulator, ArsR family. | Cd2+/Zn2+-exporting ATPase. | 0.578 |
SIQ39031.1 | SIQ87176.1 | SAMN05920897_10830 | SAMN05920897_1175 | Transcriptional regulator, ArsR family. | Cu+-exporting ATPase. | 0.526 |
SIQ39031.1 | SIR07782.1 | SAMN05920897_10830 | SAMN05920897_1354 | Transcriptional regulator, ArsR family. | DNA-binding transcriptional regulator, ArsR family. | 0.707 |
SIQ51952.1 | SIQ39031.1 | SAMN05920897_11033 | SAMN05920897_10830 | NAD-dependent deacetylase. | Transcriptional regulator, ArsR family. | 0.433 |
SIQ51952.1 | SIR07782.1 | SAMN05920897_11033 | SAMN05920897_1354 | NAD-dependent deacetylase. | DNA-binding transcriptional regulator, ArsR family. | 0.433 |
SIQ63723.1 | SIP88270.1 | SAMN05920897_11228 | SAMN05920897_101111 | Cd2+/Zn2+-exporting ATPase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.513 |
SIQ63723.1 | SIQ39031.1 | SAMN05920897_11228 | SAMN05920897_10830 | Cd2+/Zn2+-exporting ATPase. | Transcriptional regulator, ArsR family. | 0.578 |
SIQ63723.1 | SIQ87176.1 | SAMN05920897_11228 | SAMN05920897_1175 | Cd2+/Zn2+-exporting ATPase. | Cu+-exporting ATPase. | 0.875 |
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