STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR14305.1Methyl-accepting chemotaxis protein. (429 aa)    
Predicted Functional Partners:
SIQ01325.1
Purine-binding chemotaxis protein CheW.
 
 0.975
SIQ05821.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.972
SIQ04349.1
Purine-binding chemotaxis protein CheW.
 
 0.964
SIQ01350.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.962
SIP87855.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.960
SIQ21913.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.960
SIQ20675.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.960
SIQ69425.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.960
SIQ20643.1
CheW protein.
 
 0.955
SIQ69267.1
PAS domain S-box-containing protein.
  
 0.950
Your Current Organism:
Alkalispirochaeta americana
NCBI taxonomy Id: 159291
Other names: A. americana, ATCC BAA-392, Alkalispirochaeta americana (Hoover et al. 2003) Sravanthi et al. 2016, DSM 14872, Spirochaeta americana, Spirochaeta americana Hoover et al. 2003, Spirochaeta sp. ASpG1, strain ASpG1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.