STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY28342.1Ftsk gamma domain-containing protein; Belongs to the FtsK/SpoIIIE/SftA family. (754 aa)    
Predicted Functional Partners:
SDZ13496.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
  
 0.760
SDY41856.1
Cell division protein FtsQ; Essential cell division protein.
   
 
 0.757
SDY30559.1
Protein of unknown function.
    
 
 0.731
SDY67944.1
S-layer homology domain-containing protein.
    
 
 0.731
SDY99750.1
Protein of unknown function.
    
 
 0.731
SDZ21453.1
Copper amine oxidase N-terminal domain-containing protein.
    
 
 0.731
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.698
SDY42062.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
 
 0.675
SDZ23546.1
Subtilase family protein.
  
 
 0.665
xerC
Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
 
   
 0.630
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.