STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY23749.1Simple sugar transport system ATP-binding protein. (524 aa)    
Predicted Functional Partners:
SDY23688.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
SDY23721.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
SDY23781.1
Nucleoside-binding protein.
 
 0.984
SDY65666.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.979
SDY65691.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.968
SDY65600.1
Nucleoside-binding protein.
 
 
 0.967
SDY23659.1
Pyrimidine-specific ribonucleoside hydrolase.
       0.785
SDZ03741.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.722
SDY23625.1
Pyrimidine-specific ribonucleoside hydrolase.
       0.672
SDY23596.1
5-methylthioadenosine/S-adenosylhomocysteine deaminase.
       0.665
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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