STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY46111.1NAD(P)-dependent iron-only hydrogenase iron-sulfur protein. (124 aa)    
Predicted Functional Partners:
SDY67643.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
 
 0.981
SDY46142.1
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein.
 
 0.974
SDY26219.1
Iron only hydrogenase large subunit, C-terminal domain.
 
 
 0.952
SDY80283.1
Formate dehydrogenase major subunit.
  
 0.944
SDY46076.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
  
 0.940
SDY46038.1
Formate dehydrogenase major subunit.
  
 0.893
SDY86019.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.875
SDY46008.1
Formate dehydrogenase (NADP) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.867
SDY65100.1
PAS domain S-box-containing protein.
 
 
 0.862
SDY85888.1
DRTGG domain-containing protein.
 
   
 0.841
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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