Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY50544.1 | SDY50606.1 | SAMN05192546_102329 | SAMN05192546_102331 | Hypothetical protein. | Two-component system, chemotaxis family, response regulator CheY. | 0.514 |
SDY50544.1 | SDY63032.1 | SAMN05192546_102329 | SAMN05192546_103193 | Hypothetical protein. | S-layer homology domain-containing protein. | 0.619 |
SDY50544.1 | SDY66993.1 | SAMN05192546_102329 | SAMN05192546_103334 | Hypothetical protein. | Alcohol dehydrogenase, class IV. | 0.491 |
SDY50544.1 | SDY89482.1 | SAMN05192546_102329 | SAMN05192546_105171 | Hypothetical protein. | Thymidine phosphorylase. | 0.496 |
SDY50544.1 | SDY96425.1 | SAMN05192546_102329 | SAMN05192546_10624 | Hypothetical protein. | Cobalt/nickel transport system ATP-binding protein. | 0.491 |
SDY50544.1 | SDY99273.1 | SAMN05192546_102329 | SAMN05192546_106159 | Hypothetical protein. | Hypothetical protein. | 0.619 |
SDY50544.1 | SDY99352.1 | SAMN05192546_102329 | SAMN05192546_106162 | Hypothetical protein. | Fn3 associated. | 0.619 |
SDY50544.1 | SDZ23546.1 | SAMN05192546_102329 | SAMN05192546_1178 | Hypothetical protein. | Subtilase family protein. | 0.578 |
SDY50544.1 | guaB | SAMN05192546_102329 | SAMN05192546_10384 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.709 |
SDY50544.1 | rnhA | SAMN05192546_102329 | SAMN05192546_102330 | Hypothetical protein. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.613 |
SDY50606.1 | SDY50544.1 | SAMN05192546_102331 | SAMN05192546_102329 | Two-component system, chemotaxis family, response regulator CheY. | Hypothetical protein. | 0.514 |
SDY50606.1 | rnhA | SAMN05192546_102331 | SAMN05192546_102330 | Two-component system, chemotaxis family, response regulator CheY. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.658 |
SDY63032.1 | SDY50544.1 | SAMN05192546_103193 | SAMN05192546_102329 | S-layer homology domain-containing protein. | Hypothetical protein. | 0.619 |
SDY66993.1 | SDY50544.1 | SAMN05192546_103334 | SAMN05192546_102329 | Alcohol dehydrogenase, class IV. | Hypothetical protein. | 0.491 |
SDY89482.1 | SDY50544.1 | SAMN05192546_105171 | SAMN05192546_102329 | Thymidine phosphorylase. | Hypothetical protein. | 0.496 |
SDY89482.1 | guaB | SAMN05192546_105171 | SAMN05192546_10384 | Thymidine phosphorylase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.706 |
SDY96425.1 | SDY50544.1 | SAMN05192546_10624 | SAMN05192546_102329 | Cobalt/nickel transport system ATP-binding protein. | Hypothetical protein. | 0.491 |
SDY99273.1 | SDY50544.1 | SAMN05192546_106159 | SAMN05192546_102329 | Hypothetical protein. | Hypothetical protein. | 0.619 |
SDY99352.1 | SDY50544.1 | SAMN05192546_106162 | SAMN05192546_102329 | Fn3 associated. | Hypothetical protein. | 0.619 |
SDZ23546.1 | SDY50544.1 | SAMN05192546_1178 | SAMN05192546_102329 | Subtilase family protein. | Hypothetical protein. | 0.578 |
page 1 of 2