Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY31656.1 | SDY52193.1 | SAMN05192546_101302 | SAMN05192546_102385 | alanyl-tRNA synthetase. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.669 |
SDY31656.1 | SDY52226.1 | SAMN05192546_101302 | SAMN05192546_102386 | alanyl-tRNA synthetase. | Ubiquitin-conjugating enzyme. | 0.948 |
SDY31656.1 | SDY52262.1 | SAMN05192546_101302 | SAMN05192546_102387 | alanyl-tRNA synthetase. | Adenylyltransferase and sulfurtransferase. | 0.481 |
SDY31656.1 | SDY61189.1 | SAMN05192546_101302 | SAMN05192546_103127 | alanyl-tRNA synthetase. | Hypothetical protein. | 0.919 |
SDY31656.1 | SDY62124.1 | SAMN05192546_101302 | SAMN05192546_103161 | alanyl-tRNA synthetase. | Flagellar operon protein TIGR03826. | 0.919 |
SDY31656.1 | SDY78166.1 | SAMN05192546_101302 | SAMN05192546_104212 | alanyl-tRNA synthetase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.481 |
SDY31656.1 | SDZ03007.1 | SAMN05192546_101302 | SAMN05192546_10713 | alanyl-tRNA synthetase. | Hypothetical protein. | 0.481 |
SDY31656.1 | SDZ08348.1 | SAMN05192546_101302 | SAMN05192546_10884 | alanyl-tRNA synthetase. | FHA domain-containing protein. | 0.597 |
SDY31656.1 | alaS | SAMN05192546_101302 | SAMN05192546_105112 | alanyl-tRNA synthetase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.859 |
SDY52193.1 | SDY31656.1 | SAMN05192546_102385 | SAMN05192546_101302 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | alanyl-tRNA synthetase. | 0.669 |
SDY52193.1 | SDY52226.1 | SAMN05192546_102385 | SAMN05192546_102386 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Ubiquitin-conjugating enzyme. | 0.897 |
SDY52193.1 | SDY52262.1 | SAMN05192546_102385 | SAMN05192546_102387 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Adenylyltransferase and sulfurtransferase. | 0.910 |
SDY52193.1 | SDY61189.1 | SAMN05192546_102385 | SAMN05192546_103127 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Hypothetical protein. | 0.641 |
SDY52193.1 | SDY62124.1 | SAMN05192546_102385 | SAMN05192546_103161 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Flagellar operon protein TIGR03826. | 0.641 |
SDY52193.1 | SDY78166.1 | SAMN05192546_102385 | SAMN05192546_104212 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.602 |
SDY52193.1 | SDZ03007.1 | SAMN05192546_102385 | SAMN05192546_10713 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Hypothetical protein. | 0.680 |
SDY52193.1 | SDZ08348.1 | SAMN05192546_102385 | SAMN05192546_10884 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | FHA domain-containing protein. | 0.901 |
SDY52193.1 | alaS | SAMN05192546_102385 | SAMN05192546_105112 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.669 |
SDY52226.1 | SDY31656.1 | SAMN05192546_102386 | SAMN05192546_101302 | Ubiquitin-conjugating enzyme. | alanyl-tRNA synthetase. | 0.948 |
SDY52226.1 | SDY52193.1 | SAMN05192546_102386 | SAMN05192546_102385 | Ubiquitin-conjugating enzyme. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.897 |
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