STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY57879.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)    
Predicted Functional Partners:
SDY57752.1
3-hydroxyacyl-CoA dehydrogenase.
 0.999
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
 0.994
SDY34617.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.951
SDY25706.1
butyryl-CoA:acetoacetate CoA-transferase beta subunit.
 
 
 0.944
SDY25739.1
butyryl-CoA:acetoacetate CoA-transferase alpha subunit.
 
 
 0.942
SDY81135.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.940
SDY58070.1
methylmalonyl-CoA decarboxylase alpha subunit.
  
 0.929
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.921
SDY57816.1
Propionate CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
    
 0.910
SDY33868.1
succinyl-CoA:acetate CoA-transferase.
  
 
 0.904
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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