STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY62071.1FlgN protein. (164 aa)    
Predicted Functional Partners:
flgK
Flagellar hook-associated protein 1 FlgK.
 
 
 0.996
SDY62098.1
Anti-sigma-28 factor, FlgM family.
  
  
 0.985
SDY62007.1
Flagellar hook-associated protein 3.
 
 
 0.950
SDY62124.1
Flagellar operon protein TIGR03826.
 
  
 0.935
SDY91450.1
Flagellar motor switch protein FliN/FliY.
 
  
 0.904
SDY61076.1
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.899
SDY91676.1
Flagellar FliJ protein.
   
 
 0.863
SDY91816.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.863
SDY61218.1
Flagellar protein FliS.
  
  
 0.844
SDY91216.1
c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains.
 
  
 0.842
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
Server load: low (26%) [HD]