STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY91166.1Two-component system, chemotaxis family, sensor kinase CheA. (680 aa)    
Predicted Functional Partners:
SDY64245.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.998
SDY91141.1
Purine-binding chemotaxis protein CheW.
 0.996
cheB-3
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.996
SDY91450.1
Flagellar motor switch protein FliN/FliY.
 
 0.996
SDZ05189.1
Two-component system, chemotaxis family, response regulator CheV.
 0.995
SDY51146.1
PAS domain S-box-containing protein.
  
 0.993
SDY44044.1
Purine-binding chemotaxis protein CheW.
 0.988
SDY50739.1
Purine-binding chemotaxis protein CheW.
 0.986
SDY91428.1
Two-component system, chemotaxis family, response regulator CheY.
 
 0.986
SDY91118.1
Chemotaxis protein CheC.
 
 0.985
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.