STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY96311.1Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (266 aa)    
Predicted Functional Partners:
SDY96287.1
Formate C-acetyltransferase.
  
 0.995
SDY96326.1
Transcriptional regulator, Crp/Fnr family.
    
 0.977
SDY66724.1
Formate C-acetyltransferase.
  
 0.922
SDY24487.1
Adenosylcobinamide kinase.
   
    0.845
SDY96346.1
Methyl-accepting chemotaxis sensory transducer with Cache sensor.
       0.532
SDY43681.1
Ribonucleoside-triphosphate reductase class III catalytic subunit.
 
  
 0.514
SDZ05304.1
Alcohol dehydrogenase, class IV.
 
  
 0.511
cbiA
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
   
    0.491
SDY67291.1
Acetaldehyde dehydrogenase (acetylating).
 
  
 0.459
SDY34617.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.442
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.