Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY88267.1 | SDY88318.1 | SAMN05192546_105121 | SAMN05192546_105123 | Type II secretion system protein E (GspE). | Type IV pilus assembly protein PilC. | 0.995 |
SDY88267.1 | SDY88612.1 | SAMN05192546_105121 | SAMN05192546_105136 | Type II secretion system protein E (GspE). | Type IV pilus assembly protein PilM. | 0.951 |
SDY88267.1 | SDY88810.1 | SAMN05192546_105121 | SAMN05192546_105144 | Type II secretion system protein E (GspE). | Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.928 |
SDY88267.1 | SDZ03830.1 | SAMN05192546_105121 | SAMN05192546_10757 | Type II secretion system protein E (GspE). | Twitching motility protein PilT. | 0.447 |
SDY88267.1 | SDZ03924.1 | SAMN05192546_105121 | SAMN05192546_10762 | Type II secretion system protein E (GspE). | Type II secretion system protein F (GspF). | 0.985 |
SDY88318.1 | SDY88267.1 | SAMN05192546_105123 | SAMN05192546_105121 | Type IV pilus assembly protein PilC. | Type II secretion system protein E (GspE). | 0.995 |
SDY88318.1 | SDY88612.1 | SAMN05192546_105123 | SAMN05192546_105136 | Type IV pilus assembly protein PilC. | Type IV pilus assembly protein PilM. | 0.922 |
SDY88318.1 | SDY88810.1 | SAMN05192546_105123 | SAMN05192546_105144 | Type IV pilus assembly protein PilC. | Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.894 |
SDY88318.1 | SDZ03830.1 | SAMN05192546_105123 | SAMN05192546_10757 | Type IV pilus assembly protein PilC. | Twitching motility protein PilT. | 0.821 |
SDY88612.1 | SDY88267.1 | SAMN05192546_105136 | SAMN05192546_105121 | Type IV pilus assembly protein PilM. | Type II secretion system protein E (GspE). | 0.951 |
SDY88612.1 | SDY88318.1 | SAMN05192546_105136 | SAMN05192546_105123 | Type IV pilus assembly protein PilM. | Type IV pilus assembly protein PilC. | 0.922 |
SDY88612.1 | SDY88810.1 | SAMN05192546_105136 | SAMN05192546_105144 | Type IV pilus assembly protein PilM. | Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.834 |
SDY88612.1 | SDZ03830.1 | SAMN05192546_105136 | SAMN05192546_10757 | Type IV pilus assembly protein PilM. | Twitching motility protein PilT. | 0.627 |
SDY88612.1 | SDZ03924.1 | SAMN05192546_105136 | SAMN05192546_10762 | Type IV pilus assembly protein PilM. | Type II secretion system protein F (GspF). | 0.888 |
SDY88810.1 | SDY88267.1 | SAMN05192546_105144 | SAMN05192546_105121 | Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretion system protein E (GspE). | 0.928 |
SDY88810.1 | SDY88318.1 | SAMN05192546_105144 | SAMN05192546_105123 | Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus assembly protein PilC. | 0.894 |
SDY88810.1 | SDY88612.1 | SAMN05192546_105144 | SAMN05192546_105136 | Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus assembly protein PilM. | 0.834 |
SDY88810.1 | SDZ03830.1 | SAMN05192546_105144 | SAMN05192546_10757 | Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Twitching motility protein PilT. | 0.791 |
SDY88810.1 | SDZ03924.1 | SAMN05192546_105144 | SAMN05192546_10762 | Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretion system protein F (GspF). | 0.889 |
SDZ03810.1 | SDZ03830.1 | SAMN05192546_10756 | SAMN05192546_10757 | Transglutaminase-like superfamily protein. | Twitching motility protein PilT. | 0.650 |
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