Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY42457.1 | SDZ09725.1 | SAMN05192546_10281 | SAMN05192546_108150 | Acetolactate synthase, small subunit. | DNA-binding transcriptional regulator, GntR family. | 0.493 |
SDY43162.1 | SDZ09725.1 | SAMN05192546_102103 | SAMN05192546_108150 | Acetolactate synthase, small subunit. | DNA-binding transcriptional regulator, GntR family. | 0.493 |
SDZ09689.1 | SDZ09708.1 | SAMN05192546_108148 | SAMN05192546_108149 | Aconitase. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.545 |
SDZ09689.1 | SDZ09725.1 | SAMN05192546_108148 | SAMN05192546_108150 | Aconitase. | DNA-binding transcriptional regulator, GntR family. | 0.450 |
SDZ09708.1 | SDZ09689.1 | SAMN05192546_108149 | SAMN05192546_108148 | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | Aconitase. | 0.545 |
SDZ09708.1 | SDZ09725.1 | SAMN05192546_108149 | SAMN05192546_108150 | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | DNA-binding transcriptional regulator, GntR family. | 0.491 |
SDZ09725.1 | SDY42457.1 | SAMN05192546_108150 | SAMN05192546_10281 | DNA-binding transcriptional regulator, GntR family. | Acetolactate synthase, small subunit. | 0.493 |
SDZ09725.1 | SDY43162.1 | SAMN05192546_108150 | SAMN05192546_102103 | DNA-binding transcriptional regulator, GntR family. | Acetolactate synthase, small subunit. | 0.493 |
SDZ09725.1 | SDZ09689.1 | SAMN05192546_108150 | SAMN05192546_108148 | DNA-binding transcriptional regulator, GntR family. | Aconitase. | 0.450 |
SDZ09725.1 | SDZ09708.1 | SAMN05192546_108150 | SAMN05192546_108149 | DNA-binding transcriptional regulator, GntR family. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.491 |
SDZ09725.1 | SDZ09757.1 | SAMN05192546_108150 | SAMN05192546_108152 | DNA-binding transcriptional regulator, GntR family. | triphosphoribosyl-dephospho-CoA synthase. | 0.875 |
SDZ09725.1 | SDZ09828.1 | SAMN05192546_108150 | SAMN05192546_108157 | DNA-binding transcriptional regulator, GntR family. | Transcriptional regulator, GntR family. | 0.660 |
SDZ09725.1 | ispE | SAMN05192546_108150 | SAMN05192546_10350 | DNA-binding transcriptional regulator, GntR family. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.716 |
SDZ09725.1 | prmC | SAMN05192546_108150 | SAMN05192546_103224 | DNA-binding transcriptional regulator, GntR family. | Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.606 |
SDZ09757.1 | SDZ09725.1 | SAMN05192546_108152 | SAMN05192546_108150 | triphosphoribosyl-dephospho-CoA synthase. | DNA-binding transcriptional regulator, GntR family. | 0.875 |
SDZ09828.1 | SDZ09725.1 | SAMN05192546_108157 | SAMN05192546_108150 | Transcriptional regulator, GntR family. | DNA-binding transcriptional regulator, GntR family. | 0.660 |
ispE | SDZ09725.1 | SAMN05192546_10350 | SAMN05192546_108150 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | DNA-binding transcriptional regulator, GntR family. | 0.716 |
prmC | SDZ09725.1 | SAMN05192546_103224 | SAMN05192546_108150 | Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | DNA-binding transcriptional regulator, GntR family. | 0.606 |