STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ19463.1Protein of unknown function. (144 aa)    
Predicted Functional Partners:
SDZ19482.1
Protein of unknown function.
  
    0.861
SDZ19530.1
Hypothetical protein.
  
    0.860
SDZ19506.1
Uncharacterized phage protein gp47/JayE.
  
    0.859
SDZ19443.1
Hypothetical protein.
  
    0.850
SDZ19421.1
Hypothetical protein.
  
    0.847
SDZ19401.1
Hypothetical protein.
       0.772
SDZ19549.1
Hypothetical protein.
       0.748
SDZ19569.1
Hypothetical protein.
       0.727
SDZ19595.1
Hypothetical protein.
       0.693
SDZ19336.1
Phage tail sheath protein.
  
    0.571
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.