STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPC80793.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (384 aa)    
Predicted Functional Partners:
OPC82849.1
Phosphotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.840
OPC82516.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
OPC79749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
OPC84359.1
Lumazine-binding family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
OPC81167.1
Phosphotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.588
OPC81768.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.588
OPC80211.1
hydroxymethylglutaryl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
OPC80526.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
OPC81966.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
OPC85233.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
Your Current Organism:
Streptomyces scabrisporus
NCBI taxonomy Id: 159449
Other names: DSM 41855, JCM 11712, NBRC 100760, NRRL B-24202, S. scabrisporus, Streptomyces scabrisporus Xu et al. 2004, Streptomyces sp. KM-4927, strain KM-4927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.