STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPC77096.1Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
OPC77095.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
     0.549
OPC78036.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.546
B4N89_02700
Binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.542
OPC80475.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.542
B4N89_07565
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.542
OPC76782.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.542
OPC76800.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
OPC81930.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
OPC81984.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
OPC78963.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.460
Your Current Organism:
Streptomyces scabrisporus
NCBI taxonomy Id: 159449
Other names: DSM 41855, JCM 11712, NBRC 100760, NRRL B-24202, S. scabrisporus, Streptomyces scabrisporus Xu et al. 2004, Streptomyces sp. KM-4927, strain KM-4927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.