STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPC77202.1Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)    
Predicted Functional Partners:
OPC83172.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.883
OPC77201.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.820
OPC79139.1
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.818
OPC82247.1
Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
  
   0.718
OPC80724.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.716
B4N89_36675
Hypothetical protein; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.704
OPC77814.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.691
OPC82593.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.687
OPC83171.1
PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
OPC83652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.665
Your Current Organism:
Streptomyces scabrisporus
NCBI taxonomy Id: 159449
Other names: DSM 41855, JCM 11712, NBRC 100760, NRRL B-24202, S. scabrisporus, Streptomyces scabrisporus Xu et al. 2004, Streptomyces sp. KM-4927, strain KM-4927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.