STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHD20497.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)    
Predicted Functional Partners:
KHD20834.1
Condensation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.617
KHD22368.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.608
KHD20498.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.564
KHD20625.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.445
KHD22235.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.443
KHD20098.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.443
KHD21675.1
2-aminoadipate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.441
KHD19608.1
2-aminoadipate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.439
KHD18986.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.439
KHD18447.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.429
Your Current Organism:
Paraburkholderia sacchari
NCBI taxonomy Id: 159450
Other names: Burkholderia sacchari, Burkholderia sacchari Bramer et al. 2001, CCT 6771, CCUG 46043, CIP 107211, DSM 17165, IPT 101, LMG 19450, LMG:19450, P. sacchari, Paraburkholderia sacchari (Braner et al. 2001) Sawana et al. 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.