STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLD44_20315Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
BLD44_06650
Response regulator.
     
 0.835
BLD44_10185
Sigma-70 family RNA polymerase sigma factor.
  
 
   0.799
BLD44_08220
GAF domain-containing protein.
  
  
  0.773
BLD44_13020
Uncharacterized protein.
  
     0.759
BLD44_24855
annotation not available
  
     0.745
BLD44_16080
Uncharacterized protein.
  
     0.741
BLD44_02040
Pilus assembly protein PilO.
  
  
 0.730
BLD44_26020
LapA family protein.
  
     0.730
BLD44_16705
Uncharacterized protein.
  
     0.725
BLD44_17405
Uncharacterized protein.
  
     0.703
Your Current Organism:
Mastigocladus laminosus
NCBI taxonomy Id: 1594576
Other names: M. laminosus UU774, Mastigocladus laminosus UU774
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.