STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001269385_02361Unannotated protein. (783 aa)    
Predicted Functional Partners:
GCA_001269385_02360
Unannotated protein.
 
  
 0.958
GCA_001269385_02362
Unannotated protein.
 
    0.897
GCA_001269385_02363
Unannotated protein.
 
  
 0.895
GCA_001269385_02359
Unannotated protein.
       0.578
GCA_001269385_02357
Unannotated protein.
 
     0.572
GCA_001269385_02358
Unannotated protein.
       0.483
GCA_001269385_01316
Unannotated protein.
  
     0.478
GCA_001269385_01150
Unannotated protein.
  
     0.430
GCA_001269385_03641
Unannotated protein.
  
     0.410
Your Current Organism:
Limnohabitans sp. DM1
NCBI taxonomy Id: 1597955
Other names: L. sp. DM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.