STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0023Exopolysaccharide biosynthesis protein. (295 aa)    
Predicted Functional Partners:
LBAT_0024
Exopolysaccharide biosynthesis protein.
 
 
 0.996
LBAT_0025
Exopolysaccharide biosynthesis protein.
 
 
 0.992
LBAT_0022
Exopolysaccharide biosynthesis protein.
 
  
 0.946
LBAT_0026
Phospho-glucosyltransferase.
 
  
 0.919
LBAT_0028
Glycosyltransferase.
 
  
 0.635
LBAT_0027
Conserved hypothetical protein.
 
  
 0.594
LBAT_0031
Exopolysaccharide biosynthesis protein.
  
  
 0.534
LBAT_0021
Transposase.
       0.489
LBAT_0030
Glycosyltransferase.
  
  
 0.468
LBAT_0034
Exopolysaccharide biosynthesis protein.
 
  
 0.461
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.