Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0024Exopolysaccharide biosynthesis protein. (262 aa)    
Predicted Functional Partners:
LBAT_0025
Exopolysaccharide biosynthesis protein.
  
 0.998
LBAT_0023
Exopolysaccharide biosynthesis protein.
 
 
 0.996
LBAT_0026
Phospho-glucosyltransferase.
 
  
 0.957
LBAT_0022
Exopolysaccharide biosynthesis protein.
  
  
 0.819
LBAT_0028
Glycosyltransferase.
 
  
 0.650
LBAT_0031
Exopolysaccharide biosynthesis protein.
  
  
 0.642
LBAT_0027
Conserved hypothetical protein.
 
  
 0.613
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.542
metG
methionyl-tRNA synthase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
 
 0.529
LBAT_0029
Glycosyltransferase.
     
 0.500
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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