STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0145Extracellular protein. (321 aa)    
Predicted Functional Partners:
LBAT_0179
Conserved hypothetical protein.
  
     0.674
LBAT_1073
Conserved hypothetical protein.
  
     0.593
LBAT_1219
Conserved hypothetical protein.
  
     0.591
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.576
LBAT_1418
Conserved hypothetical protein.
  
     0.564
LBAT_1419
Conserved hypothetical protein.
  
     0.555
LBAT_0138
Conserved hypothetical protein.
  
     0.518
LBAT_0146
Polysaccharide biosynthesis protein.
       0.517
LBAT_0147
Oxidoreductase.
       0.516
LBAT_1522
Transcriptional regulator.
  
     0.445
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.