STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0146Polysaccharide biosynthesis protein. (287 aa)    
Predicted Functional Partners:
LBAT_0147
Oxidoreductase.
  
 
 0.792
LBAT_0026
Phospho-glucosyltransferase.
 
  
 0.608
LBAT_0041
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.564
LBAT_0148
Oxidoreductase.
       0.553
LBAT_0145
Extracellular protein.
       0.517
LBAT_1346
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.512
LBAT_1319
Galactosyltransferase.
 
  
 0.444
LBAT_1163
Undecaprenyl-phosphaten-acetyl- glucosaminyltransfera se.
  
  
 0.421
LBAT_0028
Glycosyltransferase.
 
  
 0.417
LBAT_0031
Exopolysaccharide biosynthesis protein.
 
  
 0.407
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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