STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0157Conserved hypothetical protein. (234 aa)    
Predicted Functional Partners:
LBAT_0236
Conserved hypothetical protein.
  
     0.759
LBAT_1093
Conserved hypothetical protein.
  
     0.744
LBAT_0862
Conserved hypothetical protein.
  
     0.740
ddl
D-alanyl-alanine synthase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.703
LBAT_1426
Conserved hypothetical protein.
  
     0.694
LBAT_0138
Conserved hypothetical protein.
  
     0.687
LBAT_0179
Conserved hypothetical protein.
  
     0.670
LBAT_1459
Conserved hypothetical protein.
  
     0.650
LBAT_1219
Conserved hypothetical protein.
  
     0.645
LBAT_1364
Conserved hypothetical protein.
  
     0.645
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.