STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0159Conserved hypothetical protein. (256 aa)    
Predicted Functional Partners:
LBAT_0158
Conserved hypothetical protein.
 
    0.966
LBAT_0160
Acetyl esterase.
       0.774
LBAT_0157
Conserved hypothetical protein.
 
     0.642
LBAT_0183
Multidrug resistance protein.
  
     0.538
LBAT_0161
Protein kinase.
       0.533
ddl
D-alanyl-alanine synthase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.525
LBAT_1038
Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
   
    0.500
LBAT_0483
Conserved hypothetical protein.
 
     0.461
LBAT_0519
Cell surface protein.
  
     0.450
LBAT_1012
ADP-ribose pyrophosphatase.
   
    0.445
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.