Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0267Transcriptional regulator. (242 aa)    
Predicted Functional Partners:
LBAT_0064
PTS system trehalose-specific IIABC components.
  
  
 0.630
LBAT_0263
PTS system sucrose-specific IIBC components.
  
  
 0.630
LBAT_0805
Truncated PTS system beta-glucoside-specific IIABC components.
  
  
 0.630
LBAT_0806
Truncated PTS system beta-glucoside-specific IIABC components.
  
  
 0.630
LBAT_0269
Truncated PTS system IIC component.
 
   
 0.541
LBAT_0266
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
    0.510
LBAT_0262
Transcriptional regulator.
  
     0.500
rplL
50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
   
    0.483
LBAT_0268
Truncated PTS system IIC component.
     
 0.423
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.411
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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