STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0300Transcriptional regulator. (153 aa)    
Predicted Functional Partners:
LBAT_1439
Fructose operon repressor.
  
     0.772
LBAT_1437
PTS system fructose-specific IIABC components.
  
  
 0.768
LBAT_1246
Transcriptional regulator.
  
     0.767
pfkB
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.679
LBAT_0789
PTS system IIC component.
  
  
 0.644
LBAT_0299
Transposase.
       0.541
LBAT_0613
3-oxoacyl-[acyl-carrier protein] reductase.
  
  
 0.474
LBAT_1187
3-oxoacyl-[acyl-carrier protein] reductase.
  
  
 0.474
LBAT_0785
Conserved hypothetical protein.
  
  
 0.419
LBAT_0786
Putative transcriptional antiterminator.
  
  
 0.419
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.