STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0305Conserved hypothetical protein. (71 aa)    
Predicted Functional Partners:
LBAT_0304
Hypothetical protein.
     
 0.802
LBAT_0306
Aldolase.
       0.773
LBAT_0303
PTS system galactitol-specific IIC component.
  
  
 0.756
LBAT_0302
PTS system galactitol-specific IIB component.
  
  
 0.716
LBAT_0301
PTS system galactitol-specific IIA component.
  
  
 0.657
LBAT_0823
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
   
    0.557
LBAT_1353
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.523
LBAT_1437
PTS system fructose-specific IIABC components.
  
  
 0.475
LBAT_0421
Gluconate kinase.
  
  
 0.445
LBAT_0825
Apo-citrate lyase.
   
    0.444
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.