STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0310L-fuculose phosphate aldolase. (216 aa)    
Predicted Functional Partners:
LBAT_0309
Translation initiation factor subunit; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
 0.976
LBAT_0823
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
   
    0.967
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.934
LBAT_0306
Aldolase.
  
  
  0.914
LBAT_0521
Fructose-bisphosphate aldolase.
    
 0.910
mtnK
5-methylthioribose kinase.
 
  
 0.862
LBAT_0421
Gluconate kinase.
  
  
 0.673
LBAT_0825
Apo-citrate lyase.
   
    0.619
LBAT_0311
Hypothetical protein.
       0.505
LBAT_0312
Conserved hypothetical protein.
       0.505
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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