STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0325Amino acid ABC transporter permease component. (219 aa)    
Predicted Functional Partners:
LBAT_0326
Amino acid ABC transporter permease component.
  
0.986
LBAT_0327
Amino acid ABC transporter ATP-binding component.
 
 0.976
LBAT_0328
Amino acid ABC transporter substrate binding component.
 
 
 0.956
glnQ
Glutamine ABC transporter ATP-binding component.
 
 0.860
LBAT_1389
Amino acid ABC transporter ATP-binding component.
 
 0.685
LBAT_0131
Amino acid ABC transporter ATP-binding component.
 
 0.677
LBAT_1258
glutamine-ABC transporter ATP-binding component.
 
 0.674
LBAT_1259
Glutamine ABC transporter ATP-binding component.
 
 0.665
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
     
 0.647
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
   
  
 0.646
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.