LBAT_0452 protein (Lactobacillus acetotolerans)

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Score

LBAT_0452

ABC transporter ATP-binding component. (640 aa)

Predicted Functional Partners:

rplU

0.783

rplD

0.781

rpsC

0.779

rpmD

0.777

rpsO

0.777

rplC

0.776

rpsD

0.776

rpmH

0.775

rpsG

0.774

rpsJ

0.774

Your Current Organism:

Lactobacillus acetotolerans

NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LBAT_0452	rplC	LBAT_0452	LBAT_0355	ABC transporter ATP-binding component.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.776
LBAT_0452	rplD	LBAT_0452	LBAT_0356	ABC transporter ATP-binding component.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.781
LBAT_0452	rplU	LBAT_0452	LBAT_0630	ABC transporter ATP-binding component.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.783
LBAT_0452	rpmD	LBAT_0452	LBAT_0373	ABC transporter ATP-binding component.	50S ribosomal protein L30.	0.777
LBAT_0452	rpmH	LBAT_0452	LBAT_1655	ABC transporter ATP-binding component.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.775
LBAT_0452	rpsC	LBAT_0452	LBAT_0361	ABC transporter ATP-binding component.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.779
LBAT_0452	rpsD	LBAT_0452	LBAT_1043	ABC transporter ATP-binding component.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.776
LBAT_0452	rpsG	LBAT_0452	LBAT_0352	ABC transporter ATP-binding component.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.774
LBAT_0452	rpsJ	LBAT_0452	LBAT_0354	ABC transporter ATP-binding component.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.774
LBAT_0452	rpsO	LBAT_0452	LBAT_0987	ABC transporter ATP-binding component.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.777
rplC	LBAT_0452	LBAT_0355	LBAT_0452	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ABC transporter ATP-binding component.	0.776
rplC	rplD	LBAT_0355	LBAT_0356	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplU	LBAT_0355	LBAT_0630	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.988
rplC	rpmD	LBAT_0355	LBAT_0373	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L30.	0.995
rplC	rpmH	LBAT_0355	LBAT_1655	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.968
rplC	rpsC	LBAT_0355	LBAT_0361	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsD	LBAT_0355	LBAT_1043	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.991
rplC	rpsG	LBAT_0355	LBAT_0352	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.998
rplC	rpsJ	LBAT_0355	LBAT_0354	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplC	rpsO	LBAT_0355	LBAT_0987	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.983

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